BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008F07LP1|AL425899
(802 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1801 1565 0.0
>3x_Contig1801
Length = 57606
Score = 1565 bits (789), Expect = 0.0
Identities = 800/803 (99%), Gaps = 1/803 (0%)
Strand = Plus / Plus
Query: 1 gatccagtatatactcttcggtgtctctctcgtacgaaaaagtgatttgtacgctagaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53695 gatccagtatatactcttcggtgtctctctcgtacgaaaaagtgatttgtacgctagaac 53754
Query: 61 tagagacgggctgagccatagcttaatttttgggatagcggcgtgttttattttctgcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53755 tagagacgggctgagccatagcttaatttttgggatagcggcgtgttttattttctgcag 53814
Query: 121 tttcttttaatgttcgaatgattaaagcattattcattcattgctgggaatgattttttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53815 tttcttttaatgttcgaatgattaaagcattattcattcattgctgggaatgattttttc 53874
Query: 181 ctttttcagatcaaacatactgattgcttccgtaactgatcctttcttttgatacattgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53875 ctttttcagatcaaacatactgattgcttccgtaactgatcctttcttttgatacattgt 53934
Query: 241 tggttcgttgccttcgctataatctgttctatatagagtttttttttctatttttctttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53935 tggttcgttgccttcgctataatctgttctatatagagtttttttttctatttttctttt 53994
Query: 301 aaattcttatcgtcgcgtcatcgctcatcagtacctttctgtagtaatactctgtaaaay 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 53995 aaattcttatcgtcgcgtcatcgctcatcagtacctttctgtagtaatactctgtaaaat 54054
Query: 361 tctcaagatacacggtacgtcgaagtttaataaccactgtgt-gcatagcctcatcctcc 419
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 54055 tctcaagatacacggtacgtcgaagtttaataaccactgtgtggcatagcctcatcctcc 54114
Query: 420 cggtttctatgtttactctacttcgctttttgatcttggatttgatactttttttggcat 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54115 cggtttctatgtttactctacttcgctttttgatcttggatttgatactttttttggcat 54174
Query: 480 tgtgtcgttggtgaactactttttacctggttagggtggcatcatagaaccagcttgtca 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54175 tgtgtcgttggtgaactactttttacctggttagggtggcatcatagaaccagcttgtca 54234
Query: 540 ttacacaaatatatatatatatatgtatatgtatatgtactacatgtactagatgttgtg 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54235 ttacacaaatatatatatatatatgtatatgtatatgtactacatgtactagatgttgtg 54294
Query: 600 gttatcttgtggtttgtggattcaggtctcttgctgagtgtattctgaggttcaggtgag 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54295 gttatcttgtggtttgtggattcaggtctcttgctgagtgtattctgaggttcaggtgag 54354
Query: 660 tcacggtgttttccgaccgcagcggacatgttgatgctaatacaagctttcttgtttgta 719
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54355 taacggtgttttccgaccgcagcggacatgttgatgctaatacaagctttcttgtttgta 54414
Query: 720 caacttttcactcgtctcttgttcgtccatgcagatgtttcgattgtaaaaccaactagc 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54415 caacttttcactcgtctcttgttcgtccatgcagatgtttcgattgtaaaaccaactagc 54474
Query: 780 ggtgcttcttactcaccagaatc 802
|||||||||||||||||||||||
Sbjct: 54475 ggtgcttcttactcaccagaatc 54497
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,319
Number of Sequences: 1807
Number of extensions: 11319
Number of successful extensions: 1549
Number of sequences better than 1.0e-20: 1
length of query: 802
length of database: 10,358,551
effective HSP length: 16
effective length of query: 786
effective length of database: 10,329,639
effective search space: 8119096254
effective search space used: 8119096254
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)